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11 June, 23:56

5. Poly-L-glutamic acid adopts a random coil structure at physiological pH. Under what pH conditions might poly-L-glutamic acid adopt an α-helical structure?

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  1. 12 June, 00:12
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    Poly-L-glutamic acid adopts an α-helical structure at conditions of pH 2.0 - 6.0

    It becomes prominent & starts appearing properly at pH 5.0

    Explanation:

    The helix formation dynamics of poly-L-glutamic acids (PGAs) happen as thus.

    The helix formation of PGA from random coil usually starts by initiating a pH jump from pH 8.0 to pH 4.9.

    The structure of the γ-PGA solution is highly related to the deprotonated degree of the COOH groups in the γ-PGA side chains.

    Generally the side chain or R group of glutamate contains carboxylic acid group with pKa of 4.25. At pH 5, side chain of glutamate is largely ionosed with a 1-charge. Above pH 5, this carboxylic acid is not as ionized and doesn't force the structure to adopt an α-helical structure.

    The random coil structure comes back because the intramolecular hydrogen bonds in the γ-PGA-H structure decrease and intramolecular electrostatic repulsion increases as pH increases. Hence, at high pH degrees, the structure takes on a random coil structure.
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